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clustalw alignment software  (DNASTAR)


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    Structured Review

    DNASTAR clustalw alignment software
    Clustalw Alignment Software, supplied by DNASTAR, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/clustalw+alignment+software/clustalw+program/pm39950824-313-15-15
    Average 90 stars, based on 1 article reviews
    clustalw alignment software - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Sequencing:

    Article Title: Antibody-blocking of a tick transporter impairs Anaplasma phagocytophilum colonization in Haemaphysalis longicornis ticks
    Article Snippet: .. Amino acid sequence alignments for H. longicornis OATPs and orthologs from various organisms were performed using DNASTAR CLUSTALW alignment software. ..

    Article Title: Rickettsial pathogen inhibits tick cell death through tryptophan metabolite mediated activation of p38 MAP kinase
    Article Snippet: .. Amino acid sequence alignments for PLD3, Syntaxin, SMP30, VPS26B and p38 MAPK orthologs from various organisms was performed using DNASTAR CLUSTALW alignment software. ..

    Article Title: Characterization of the 3rd International Standard for hepatitis B virus surface antigen (HBsAg).
    Article Snippet: Accepted Manuscript Title: Characterization of the 3rd International Standard for hepatitis B virus surface antigen (HBsAg) Author: Pia L. Seiz Christina Mohr Dianna E. Wilkinson John Ziebuhr Christian G. Schuettler Wolfram H. Gerlich Dieter Glebe PII: S1386-6532(16)30111-1 DOI: http://dx.doi.org/doi:10.1016/j.jcv.2016.05.009 Reference: JCV 3626 To appear in: Journal of Clinical Virology Received date: 18-2-2016 Revised date: 16-5-2016 Accepted date: 17-5-2016 Please cite this article as: Seiz Pia L, Mohr Christina, Wilkinson Dianna E, Ziebuhr John, Schuettler Christian G, Gerlich Wolfram H, Glebe Dieter.Characterization of the 3rd International Standard for hepatitis B virus surface antigen (HBsAg).Journal of Clinical Virology http://dx.doi.org/10.1016/j.jcv.2016.05.009 This is a PDF file of an unedited manuscript that has been accepted for publication.. As a service to our customers we are providing this early version of the manuscript.. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form.

    Article Title: Diversity and stress tolerance in rhizobia from Parque Chaqueño region of Argentina nodulating Prosopis alba
    Article Snippet: The aim of this work was to investigate the genetic diversity, symbiotic effectiveness, drought tolerance, and indole acetic acid production of indigenous rhizobial populations in the Parque Chaqueño of Argentina able to nodulateProsopis alba, the dominant forest tree of this region.. The populations were sampled at five locations from the Arid, Semi-arid, and Humid Chaco in the Parque Chaqueño region.. A set of rhizobial strains able to nodulate P. albawas obtained and selected based on their molecular diversity.

    Article Title: Rickettsial pathogen augments tick vesicular-associated membrane proteins for infection and survival in the vector host.
    Article Snippet: .. Amino acid sequence alignments for VAMP3 and VAMP4 orthologs from various organisms were performed using DNASTAR CLUSTALW alignment software. ..

    Software:

    Article Title: Antibody-blocking of a tick transporter impairs Anaplasma phagocytophilum colonization in Haemaphysalis longicornis ticks
    Article Snippet: .. Amino acid sequence alignments for H. longicornis OATPs and orthologs from various organisms were performed using DNASTAR CLUSTALW alignment software. ..

    Article Title: Oligopeptidase B from Trypanosoma evansi
    Article Snippet: .. B, an unrooted dendrogram was prepared by comparing the full-length amino acid sequences using the ClustalW alignment software of the MEGALIGN program (DNASTAR). ..

    Article Title: Rickettsial pathogen inhibits tick cell death through tryptophan metabolite mediated activation of p38 MAP kinase
    Article Snippet: .. Amino acid sequence alignments for PLD3, Syntaxin, SMP30, VPS26B and p38 MAPK orthologs from various organisms was performed using DNASTAR CLUSTALW alignment software. ..

    Article Title: Characterization of the 3rd International Standard for hepatitis B virus surface antigen (HBsAg).
    Article Snippet: Accepted Manuscript Title: Characterization of the 3rd International Standard for hepatitis B virus surface antigen (HBsAg) Author: Pia L. Seiz Christina Mohr Dianna E. Wilkinson John Ziebuhr Christian G. Schuettler Wolfram H. Gerlich Dieter Glebe PII: S1386-6532(16)30111-1 DOI: http://dx.doi.org/doi:10.1016/j.jcv.2016.05.009 Reference: JCV 3626 To appear in: Journal of Clinical Virology Received date: 18-2-2016 Revised date: 16-5-2016 Accepted date: 17-5-2016 Please cite this article as: Seiz Pia L, Mohr Christina, Wilkinson Dianna E, Ziebuhr John, Schuettler Christian G, Gerlich Wolfram H, Glebe Dieter.Characterization of the 3rd International Standard for hepatitis B virus surface antigen (HBsAg).Journal of Clinical Virology http://dx.doi.org/10.1016/j.jcv.2016.05.009 This is a PDF file of an unedited manuscript that has been accepted for publication.. As a service to our customers we are providing this early version of the manuscript.. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form.

    Article Title: Pyroglutamyl peptidase type I from Trypanosoma brucei: a new virulence factor from African trypanosomes that de-blocks regulatory peptides in the plasma of infected hosts
    Article Snippet: Interestingly, T. brucei brucei PGP (hereafter ‘trypanosome PGP’) is the most evolutionarily divergent member of this family of enzymes, including homologues from prokaryotic and eukaryotic organisms (Figure 2B), exhibiting 11 and 17% sequence identity respectively with the B. amyloliquefaciens and c© 2006 Biochemical Society (A) Purity of PGP preparations. .. Native PGP purified from infected rat plasma, and recombinant catalytically active wild-type (WT) or a catalytically inactive C167A variant (C167A) were resolved on a reducing SDS/15 % polyacrylamide gel, and proteins were visualized by Coomassie Blue staining. (B) An unrooted dendrogram was prepared by comparing the full-length PGP amino acid sequences using the ClustalW alignment software of the MEGALIGN program (DNASTAR) with a PAM250 weight table set with: ktuple = 1, gap penalty = 3 and gap window = 5. ..

    Article Title: Diversity and stress tolerance in rhizobia from Parque Chaqueño region of Argentina nodulating Prosopis alba
    Article Snippet: The aim of this work was to investigate the genetic diversity, symbiotic effectiveness, drought tolerance, and indole acetic acid production of indigenous rhizobial populations in the Parque Chaqueño of Argentina able to nodulateProsopis alba, the dominant forest tree of this region.. The populations were sampled at five locations from the Arid, Semi-arid, and Humid Chaco in the Parque Chaqueño region.. A set of rhizobial strains able to nodulate P. albawas obtained and selected based on their molecular diversity.

    Article Title: Rickettsial pathogen augments tick vesicular-associated membrane proteins for infection and survival in the vector host.
    Article Snippet: .. Amino acid sequence alignments for VAMP3 and VAMP4 orthologs from various organisms were performed using DNASTAR CLUSTALW alignment software. ..

    Purification:

    Article Title: Pyroglutamyl peptidase type I from Trypanosoma brucei: a new virulence factor from African trypanosomes that de-blocks regulatory peptides in the plasma of infected hosts
    Article Snippet: Interestingly, T. brucei brucei PGP (hereafter ‘trypanosome PGP’) is the most evolutionarily divergent member of this family of enzymes, including homologues from prokaryotic and eukaryotic organisms (Figure 2B), exhibiting 11 and 17% sequence identity respectively with the B. amyloliquefaciens and c© 2006 Biochemical Society (A) Purity of PGP preparations. .. Native PGP purified from infected rat plasma, and recombinant catalytically active wild-type (WT) or a catalytically inactive C167A variant (C167A) were resolved on a reducing SDS/15 % polyacrylamide gel, and proteins were visualized by Coomassie Blue staining. (B) An unrooted dendrogram was prepared by comparing the full-length PGP amino acid sequences using the ClustalW alignment software of the MEGALIGN program (DNASTAR) with a PAM250 weight table set with: ktuple = 1, gap penalty = 3 and gap window = 5. ..

    Infection:

    Article Title: Pyroglutamyl peptidase type I from Trypanosoma brucei: a new virulence factor from African trypanosomes that de-blocks regulatory peptides in the plasma of infected hosts
    Article Snippet: Interestingly, T. brucei brucei PGP (hereafter ‘trypanosome PGP’) is the most evolutionarily divergent member of this family of enzymes, including homologues from prokaryotic and eukaryotic organisms (Figure 2B), exhibiting 11 and 17% sequence identity respectively with the B. amyloliquefaciens and c© 2006 Biochemical Society (A) Purity of PGP preparations. .. Native PGP purified from infected rat plasma, and recombinant catalytically active wild-type (WT) or a catalytically inactive C167A variant (C167A) were resolved on a reducing SDS/15 % polyacrylamide gel, and proteins were visualized by Coomassie Blue staining. (B) An unrooted dendrogram was prepared by comparing the full-length PGP amino acid sequences using the ClustalW alignment software of the MEGALIGN program (DNASTAR) with a PAM250 weight table set with: ktuple = 1, gap penalty = 3 and gap window = 5. ..

    Clinical Proteomics:

    Article Title: Pyroglutamyl peptidase type I from Trypanosoma brucei: a new virulence factor from African trypanosomes that de-blocks regulatory peptides in the plasma of infected hosts
    Article Snippet: Interestingly, T. brucei brucei PGP (hereafter ‘trypanosome PGP’) is the most evolutionarily divergent member of this family of enzymes, including homologues from prokaryotic and eukaryotic organisms (Figure 2B), exhibiting 11 and 17% sequence identity respectively with the B. amyloliquefaciens and c© 2006 Biochemical Society (A) Purity of PGP preparations. .. Native PGP purified from infected rat plasma, and recombinant catalytically active wild-type (WT) or a catalytically inactive C167A variant (C167A) were resolved on a reducing SDS/15 % polyacrylamide gel, and proteins were visualized by Coomassie Blue staining. (B) An unrooted dendrogram was prepared by comparing the full-length PGP amino acid sequences using the ClustalW alignment software of the MEGALIGN program (DNASTAR) with a PAM250 weight table set with: ktuple = 1, gap penalty = 3 and gap window = 5. ..

    Recombinant:

    Article Title: Pyroglutamyl peptidase type I from Trypanosoma brucei: a new virulence factor from African trypanosomes that de-blocks regulatory peptides in the plasma of infected hosts
    Article Snippet: Interestingly, T. brucei brucei PGP (hereafter ‘trypanosome PGP’) is the most evolutionarily divergent member of this family of enzymes, including homologues from prokaryotic and eukaryotic organisms (Figure 2B), exhibiting 11 and 17% sequence identity respectively with the B. amyloliquefaciens and c© 2006 Biochemical Society (A) Purity of PGP preparations. .. Native PGP purified from infected rat plasma, and recombinant catalytically active wild-type (WT) or a catalytically inactive C167A variant (C167A) were resolved on a reducing SDS/15 % polyacrylamide gel, and proteins were visualized by Coomassie Blue staining. (B) An unrooted dendrogram was prepared by comparing the full-length PGP amino acid sequences using the ClustalW alignment software of the MEGALIGN program (DNASTAR) with a PAM250 weight table set with: ktuple = 1, gap penalty = 3 and gap window = 5. ..

    Variant Assay:

    Article Title: Pyroglutamyl peptidase type I from Trypanosoma brucei: a new virulence factor from African trypanosomes that de-blocks regulatory peptides in the plasma of infected hosts
    Article Snippet: Interestingly, T. brucei brucei PGP (hereafter ‘trypanosome PGP’) is the most evolutionarily divergent member of this family of enzymes, including homologues from prokaryotic and eukaryotic organisms (Figure 2B), exhibiting 11 and 17% sequence identity respectively with the B. amyloliquefaciens and c© 2006 Biochemical Society (A) Purity of PGP preparations. .. Native PGP purified from infected rat plasma, and recombinant catalytically active wild-type (WT) or a catalytically inactive C167A variant (C167A) were resolved on a reducing SDS/15 % polyacrylamide gel, and proteins were visualized by Coomassie Blue staining. (B) An unrooted dendrogram was prepared by comparing the full-length PGP amino acid sequences using the ClustalW alignment software of the MEGALIGN program (DNASTAR) with a PAM250 weight table set with: ktuple = 1, gap penalty = 3 and gap window = 5. ..

    Staining:

    Article Title: Pyroglutamyl peptidase type I from Trypanosoma brucei: a new virulence factor from African trypanosomes that de-blocks regulatory peptides in the plasma of infected hosts
    Article Snippet: Interestingly, T. brucei brucei PGP (hereafter ‘trypanosome PGP’) is the most evolutionarily divergent member of this family of enzymes, including homologues from prokaryotic and eukaryotic organisms (Figure 2B), exhibiting 11 and 17% sequence identity respectively with the B. amyloliquefaciens and c© 2006 Biochemical Society (A) Purity of PGP preparations. .. Native PGP purified from infected rat plasma, and recombinant catalytically active wild-type (WT) or a catalytically inactive C167A variant (C167A) were resolved on a reducing SDS/15 % polyacrylamide gel, and proteins were visualized by Coomassie Blue staining. (B) An unrooted dendrogram was prepared by comparing the full-length PGP amino acid sequences using the ClustalW alignment software of the MEGALIGN program (DNASTAR) with a PAM250 weight table set with: ktuple = 1, gap penalty = 3 and gap window = 5. ..



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